BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011A11SP1|AL426145
(773 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1304 1527 0.0
>3x_Contig1304
Length = 6732
Score = 1527 bits (769), Expect = 0.0
Identities = 771/773 (99%)
Strand = Plus / Plus
Query: 1 gatctctatcaattttgcgactcaaagtagtcatattatcaatatcagtgttctgttgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5454 gatctctatcaattttgcgactcaaagtagtcatattatcaatatcagtgttctgttgcc 5513
Query: 61 ctatcccattctcatatatctttgaaataatgttgctcttacggccagtggtttcgttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5514 ctatcccattctcatatatctttgaaataatgttgctcttacggccagtggtttcgttat 5573
Query: 121 agtcttttgccagttcgataaagtttgcaatcaatttcccaccaagctcagaacagcacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5574 agtcttttgccagttcgataaagtttgcaatcaatttcccaccaagctcagaacagcacg 5633
Query: 181 attctggatgatattgcactccataccatggttttccactaatcctaccgcccataagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634 attctggatgatattgcactccataccatggttttccactaatcctaccgcccataagaa 5693
Query: 241 cttttttaccatcatctatagtttctgataatggaattattgtcgatgaattaggatctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5694 cttttttaccatcatctatagtttctgataatggaattattgtcgatgaattaggatctg 5753
Query: 301 caatcacatgcaaagaatggkatcttactgaattgaaggcaatcggatatccattgtaca 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 5754 caatcacatgcaaagaatggtatcttactgaattgaaggcaatcggatatccattgtaca 5813
Query: 361 gcccaatgctattatcggtaacattaacctgaaatacttggccgtgtctaacattaccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5814 gcccaatgctattatcggtaacattaacctgaaatacttggccgtgtctaacattaccca 5873
Query: 421 attgttcaacactggcaccattcgcatggcacatgacttggaaaccaagacatattccga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5874 attgttcaacactggcaccattcgcatggcacatgacttggaaaccaagacatattccga 5933
Query: 481 gaattggaataacatcggaatcgttaaacaaagaagcaattataccgatatctgtgggtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5934 gaattggaataacatcggaatcgttaaacaaagaagcaattataccgatatctgtgggtc 5993
Query: 541 cgttcactggattaccaggaccaggaccaatgacaatcgcatcaaataatctcaaaaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5994 cgttcactggattaccaggaccaggaccaatgacaatcgcatcaaataatctcaaaaatg 6053
Query: 601 gtttcaactcattgtaactttgaraagtgtcattatgaattgtgattacctcgatgtctt 660
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6054 gtttcaactcattgtaactttgaaaagtgtcattatgaattgtgattacctcgatgtctt 6113
Query: 661 gcccctgctcctttatcagctcaacaacattatatgtgaacgagtcataagagtccacaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6114 gcccctgctcctttatcagctcaacaacattatatgtgaacgagtcataagagtccacaa 6173
Query: 721 acaaaacagaaaaagtcatccgtctgcacaaagaacgaccaatactagtactc 773
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6174 acaaaacagaaaaagtcatccgtctgcacaaagaacgaccaatactagtactc 6226
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5762
Number of Sequences: 1807
Number of extensions: 5762
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 773
length of database: 10,358,551
effective HSP length: 16
effective length of query: 757
effective length of database: 10,329,639
effective search space: 7819536723
effective search space used: 7819536723
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)